EnhancerDB
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  3. rs12752653[chr1:229362385]
Enhancers that have rs12752653[chr1:229362385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12752653[chr1:229362385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229362375 229362387 TFAP2A JASPAR yes 35977065
chr1 229362375 229362387 TFAP2B JASPAR yes 35977066
chr1 229362375 229362387 TFAP2C JASPAR yes 35977067
chr1 229362381 229362401 ESR1 JASPAR yes 35977068
Genes associated with rs12752653[chr1:229362385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More