EnhancerDB
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  3. rs12759588[chr1:225795923]
Enhancers that have rs12759588[chr1:225795923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12759588[chr1:225795923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225795909 225795924 FOXP1 JASPAR yes 35754876
chr1 225795910 225795931 IRF1 JASPAR yes 35754880
chr1 225795916 225795931 FOXP1 JASPAR yes 35754882
chr1 225795916 225795937 IRF1 JASPAR yes 35754883
chr1 225795917 225795932 FOXP1 JASPAR yes 35754884
chr1 225795917 225795938 IRF1 JASPAR yes 35754885
chr1 225795918 225795933 FOXP1 JASPAR yes 35754886
chr1 225795918 225795939 IRF1 JASPAR yes 35754887
chr1 225795919 225795934 FOXP1 JASPAR yes 35754888
chr1 225795920 225795935 FOXP1 JASPAR yes 35754889
chr1 225795920 225795941 IRF1 JASPAR yes 35754890
chr1 225795921 225795936 FOXP1 JASPAR yes 35754891
chr1 225795921 225795942 IRF1 JASPAR yes 35754892
chr1 225795922 225795937 FOXP1 JASPAR yes 35754893
chr1 225795922 225795943 IRF1 JASPAR yes 35754894
chr1 225795923 225795938 FOXP1 JASPAR yes 35754895
chr1 225795923 225795944 IRF1 JASPAR yes 35754896
Genes associated with rs12759588[chr1:225795923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More