EnhancerDB
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  3. rs12815890[chr12:51767187]
Enhancers that have rs12815890[chr12:51767187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 51760425 51770795 enh14718
Astrocyte Uterus Blood (T-cell) Stomach Kidney Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs12815890[chr12:51767187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 51767176 51767187 HOXC13 JASPAR yes 120885347
chr12 51767176 51767187 HOXD12 JASPAR yes 120885348
chr12 51767184 51767195 NFKB1 JASPAR yes 120885350
chr12 51767184 51767197 NFKB1 JASPAR yes 120885351
chr12 51767184 51767197 NFKB2 JASPAR yes 120885352
chr12 51767185 51767195 NFKB1 JASPAR yes 120885353
chr12 51767185 51767195 RELA JASPAR yes 120885354
chr12 51767185 51767196 NFKB1 JASPAR yes 120885355
chr12 51767187 51767201 SPI1 JASPAR yes 120885356
chr12 51767187 51767201 SPIC JASPAR yes 120885357
Genes associated with rs12815890[chr12:51767187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 51745031 51786651 - GALNT6 ENSG00000139629.11 51786651 0 Lung 0.00287252 12068
chr12 50720013 50790405 - FAM186A ENSG00000185958.5 50790405 976782 Adrenal 0.184174 12051