EnhancerDB
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  3. rs12824450[chr12:46879960]
Enhancers that have rs12824450[chr12:46879960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46872285 46895935 enh14678
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs12824450[chr12:46879960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46879955 46879967 PKNOX2 JASPAR yes 120628128
chr12 46879956 46879965 SNAI2 JASPAR yes 120628129
chr12 46879956 46879966 FIGLA JASPAR yes 120628130
chr12 46879956 46879966 ID4 JASPAR yes 120628131
chr12 46879956 46879966 TCF3 JASPAR yes 120628132
chr12 46879956 46879966 TCF4 JASPAR yes 120628133
chr12 46879958 46879967 ZEB1 JASPAR yes 120628134
Genes associated with rs12824450[chr12:46879960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More