EnhancerDB
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  3. rs12888276[chr14:77401118]
Enhancers that have rs12888276[chr14:77401118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 77400862 77447355 enh3335
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12888276[chr14:77401118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 77398883 77401173 ZNF143 GTRD no Epithelial (MCF-7) 21631049
chr14 77398883 77401173 ZNF143 GTRD no Epithelial (MCF-7) 21631050
chr14 77399332 77401302 ZNF143 GTRD no Epithelial (MCF-7) 21631053
chr14 77399332 77401302 ZNF143 GTRD no Epithelial (MCF-7) 21631054
chr14 77399386 77401211 ZNF143 GTRD no Epithelial (MCF-7) 21631057
chr14 77399386 77401211 ZNF143 GTRD no Epithelial (MCF-7) 21631058
chr14 77399427 77401156 ZNF143 GTRD no Epithelial (MCF-7) 21631059
chr14 77399427 77401156 ZNF143 GTRD no Epithelial (MCF-7) 21631060
chr14 77399491 77401174 ZNF143 GTRD no Epithelial (MCF-7) 21631066
chr14 77399491 77401174 ZNF143 GTRD no Epithelial (MCF-7) 21631067
chr14 77399680 77401159 ZNF143 GTRD no Epithelial (MCF-7) 21631074
chr14 77399680 77401159 ZNF143 GTRD no Epithelial (MCF-7) 21631075
chr14 77401114 77401126 PROX1 JASPAR yes 116708859
Genes associated with rs12888276[chr14:77401118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More