EnhancerDB
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  3. rs12895438[chr14:69122391]
Enhancers that have rs12895438[chr14:69122391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 69119325 69164775 enh3300
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12895438[chr14:69122391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 69122380 69122394 GLIS2 JASPAR yes 116242719
chr14 69122380 69122394 ZIC1 JASPAR yes 116242720
chr14 69122380 69122395 ZIC3 JASPAR yes 116242721
chr14 69122380 69122395 ZIC4 JASPAR yes 116242722
chr14 69122385 69122405 ESR1 JASPAR yes 116242723
chr14 69122389 69122407 ESR2 JASPAR yes 116242724
chr14 69122390 69122405 ESR2 JASPAR yes 116242725
chr14 69122391 69122395 LFA1 TRANSFAC yes 116242726
Genes associated with rs12895438[chr14:69122391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More