EnhancerDB
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  3. rs1290494[chr1:39654698]
Enhancers that have rs1290494[chr1:39654698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1290494[chr1:39654698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39654685 39654705 TP63 JASPAR yes 28264731
chr1 39654686 39654704 TP63 JASPAR yes 28264732
chr1 39654689 39654700 FOSL2 JASPAR yes 28264733
chr1 39654693 39654699 YY1 JASPAR yes 28264734
Genes associated with rs1290494[chr1:39654698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More