EnhancerDB
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  3. rs12919965[chr16:85260689]
Enhancers that have rs12919965[chr16:85260689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12919965[chr16:85260689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85260361 85262190 ZNF143 GTRD no Epithelial (MCF-7) 21721585
chr16 85260451 85261423 TCF7L2 GTRD no Colon (HCT116) 21721586
chr16 85260510 85262136 ZNF143 GTRD no Epithelial (MCF-7) 21721587
chr16 85260519 85261730 TCF7L2 GTRD no Colon (HCT116) 21721588
chr16 85260523 85261776 TCF7L2 GTRD no Colon (HCT116) 21721589
chr16 85260525 85261673 TCF7L2 GTRD no Colon (HCT116) 21721590
chr16 85260600 85261110 ZNF274 GTRD no Blood (GM12878) 21721591
chr16 85260605 85260985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721592
chr16 85260622 85261218 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721593
chr16 85260628 85260872 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721594
chr16 85260658 85261022 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721595
chr16 85260658 85261038 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721596
chr16 85260682 85260703 ZNF263 JASPAR yes 12035362
Genes associated with rs12919965[chr16:85260689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More