EnhancerDB
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  3. rs12923970[chr16:85261457]
Enhancers that have rs12923970[chr16:85261457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12923970[chr16:85261457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85260361 85262190 ZNF143 GTRD no Epithelial (MCF-7) 21721585
chr16 85260510 85262136 ZNF143 GTRD no Epithelial (MCF-7) 21721587
chr16 85260519 85261730 TCF7L2 GTRD no Colon (HCT116) 21721588
chr16 85260523 85261776 TCF7L2 GTRD no Colon (HCT116) 21721589
chr16 85260525 85261673 TCF7L2 GTRD no Colon (HCT116) 21721590
chr16 85260719 85262097 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721598
chr16 85260720 85261457 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721600
chr16 85260747 85261465 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721606
chr16 85260854 85261538 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721626
chr16 85260989 85261579 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721631
chr16 85261008 85261649 ZNF274 GTRD no Liver (HepG2) 21721633
chr16 85261035 85261692 ZNF274 GTRD no Bone Marrow (K562) 21721635
chr16 85261084 85261648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721637
chr16 85261106 85261701 ZNF274 GTRD no Liver (HepG2) 21721640
chr16 85261125 85261625 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721641
chr16 85261133 85261947 ZNF274 GTRD no Liver (HepG2) 21721642
chr16 85261135 85261465 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721643
chr16 85261158 85261620 ZNF274 GTRD no Liver (HepG2) 21721644
chr16 85261180 85261564 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721646
chr16 85261181 85261501 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721647
chr16 85261386 85263193 ZNF274 GTRD no Bone Marrow (K562) 21721652
chr16 85261395 85263673 ZNF274 GTRD no Bone Marrow (K562) 21721653
chr16 85261455 85261460 GATA2 JASPAR yes 12035472
Genes associated with rs12923970[chr16:85261457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More