EnhancerDB
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  3. rs12925388[chr16:81616668]
Enhancers that have rs12925388[chr16:81616668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81542851 81638595 enh16838
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12925388[chr16:81616668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81615804 81617737 TCF7L2 GTRD no Colon (HCT116) 21717677
chr16 81615804 81617737 TCF7L2 GTRD no Colon (HCT116) 108209733
chr16 81616176 81617770 ZNF143 GTRD no Epithelial (MCF-7) 21717678
chr16 81616176 81617770 ZNF143 GTRD no Epithelial (MCF-7) 108209734
chr16 81616211 81618756 ZBTB33 GTRD no Lung (A549) 108209735
chr16 81616664 81616676 POU2F1 JASPAR yes 11847306
chr16 81616664 81616677 POU3F3 JASPAR yes 11847307
chr16 81616664 81616678 POU1F1 JASPAR yes 11847308
chr16 81616665 81616677 POU3F1 JASPAR yes 11847309
chr16 81616665 81616677 POU3F2 JASPAR yes 11847310
chr16 81616666 81616670 YY1 TRANSFAC yes 11847311
chr16 81616666 81616675 POU5F1B JASPAR yes 11847312
Genes associated with rs12925388[chr16:81616668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More