EnhancerDB
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Enhancers that have rs12930815[chr16:4348635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12930815[chr16:4348635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4343227 4348676 ZNF143 GTRD no Epithelial (MCF-7) 21686440
chr16 4343227 4348676 ZNF143 GTRD no Epithelial (MCF-7) 108176173
chr16 4347406 4348649 TCF7L2 GTRD no Colon (HCT116) 21686538
chr16 4347455 4348644 ZNF143 GTRD no Epithelial (MCF-7) 21686539
chr16 4347565 4348756 ZNF143 GTRD no Epithelial (MCF-7) 21686542
chr16 4348624 4348639 FOXA1 JASPAR yes 9268289
chr16 4348625 4348640 FOXP1 JASPAR yes 9268290
chr16 4348626 4348637 FOXP2 JASPAR yes 9268291
chr16 4348626 4348638 FOXC2 JASPAR yes 9268292
chr16 4348626 4348640 POU1F1 JASPAR yes 9268293
chr16 4348627 4348638 FOXB1 JASPAR yes 9268294
chr16 4348627 4348638 FOXC1 JASPAR yes 9268295
chr16 4348627 4348643 POU4F2 JASPAR yes 9268296
chr16 4348627 4348643 POU4F3 JASPAR yes 9268297
chr16 4348628 4348639 FOXA1 JASPAR yes 9268299
chr16 4348629 4348644 HNF1A JASPAR yes 9268300
chr16 4348631 4348638 NKX3-1 JASPAR yes 9268301
chr16 4348631 4348647 POU4F2 JASPAR yes 9268302
chr16 4348631 4348647 POU4F3 JASPAR yes 9268303
chr16 4348632 4348647 FOXA1 JASPAR yes 9268304
chr16 4348633 4348645 FOXI1 JASPAR yes 9268305
chr16 4348633 4348647 POU4F1 JASPAR yes 9268306
chr16 4348633 4348648 HNF1A JASPAR yes 9268307
chr16 4348634 4348646 FOXC2 JASPAR yes 9268308
chr16 4348634 4348648 ONECUT3 JASPAR yes 9268309
chr16 4348635 4348646 FOXB1 JASPAR yes 9268310
chr16 4348635 4348646 FOXC1 JASPAR yes 9268311
chr16 4348635 4348646 PROP1 JASPAR yes 9268312
Genes associated with rs12930815[chr16:4348635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More