EnhancerDB
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  3. rs12936509[chr17:78638305]
Enhancers that have rs12936509[chr17:78638305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12936509[chr17:78638305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78638288 78638309 IRF1 JASPAR yes 56264587
chr17 78638291 78638305 SPI1 JASPAR yes 56264589
chr17 78638291 78638305 SPIC JASPAR yes 56264590
Genes associated with rs12936509[chr17:78638305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More