EnhancerDB
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  3. rs12940843[chr17:780632]
Enhancers that have rs12940843[chr17:780632]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12940843[chr17:780632]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 780625 780635 ID4 JASPAR yes 52635736
chr17 780626 780635 SNAI2 JASPAR yes 52635737
chr17 780627 780632 USF2 TRANSFAC yes 52635738
Genes associated with rs12940843[chr17:780632], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More