EnhancerDB
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  3. rs12940978[chr17:42178117]
Enhancers that have rs12940978[chr17:42178117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12940978[chr17:42178117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42178115 42178130 MEF2C JASPAR yes 54387152
chr17 42178116 42178131 MEF2A JASPAR yes 54387153
chr17 42178117 42178129 MEF2A JASPAR yes 54387154
chr17 42178117 42178129 MEF2D JASPAR yes 54387155
Genes associated with rs12940978[chr17:42178117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More