EnhancerDB
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  3. rs12945571[chr17:796091]
Enhancers that have rs12945571[chr17:796091]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12945571[chr17:796091]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 796082 796094 FOXC2 JASPAR yes 52638080
chr17 796083 796095 FOXI1 JASPAR yes 52638081
chr17 796087 796098 CDX2 JASPAR yes 52638082
chr17 796089 796098 CDX1 JASPAR yes 52638083
chr17 796089 796099 HOXA13 JASPAR yes 52638084
Genes associated with rs12945571[chr17:796091], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More