EnhancerDB
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  3. rs12948073[chr17:55559183]
Enhancers that have rs12948073[chr17:55559183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12948073[chr17:55559183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55559173 55559185 POU2F1 JASPAR yes 54959914
chr17 55559173 55559186 POU3F3 JASPAR yes 54959915
chr17 55559173 55559187 POU1F1 JASPAR yes 54959916
chr17 55559174 55559186 POU3F1 JASPAR yes 54959917
chr17 55559174 55559186 POU3F2 JASPAR yes 54959918
chr17 55559175 55559184 POU3F4 JASPAR yes 54959919
chr17 55559175 55559184 POU5F1B JASPAR yes 54959920
Genes associated with rs12948073[chr17:55559183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More