EnhancerDB
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  3. rs12950125[chr17:55533169]
Enhancers that have rs12950125[chr17:55533169]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12950125[chr17:55533169]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55533153 55533169 NFYA JASPAR yes 54956149
chr17 55533160 55533174 XBP1 JASPAR yes 54956150
chr17 55533162 55533173 NFE2L2 JASPAR yes 54956151
chr17 55533165 55533171 ATF1 TRANSFAC yes 54956152
chr17 55533167 55533178 ESRRA JASPAR yes 54956153
Genes associated with rs12950125[chr17:55533169], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More