EnhancerDB
  1. Home
  2. SNP
  3. rs12951927[chr17:2804858]
Enhancers that have rs12951927[chr17:2804858]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12951927[chr17:2804858]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2804848 2804868 PPARG JASPAR yes 52784644
chr17 2804851 2804868 RXRA JASPAR yes 52784646
chr17 2804856 2804862 SOX10 JASPAR yes 52784648
Genes associated with rs12951927[chr17:2804858], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More