EnhancerDB
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  3. rs12953267[chr17:48990965]
Enhancers that have rs12953267[chr17:48990965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12953267[chr17:48990965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48989629 49003712 ZBTB33 GTRD no Lung (A549) 108271465
chr17 48989629 49003712 ZBTB33 GTRD no Lung (A549) 108271466
chr17 48989629 49003712 ZBTB33 GTRD no Lung (A549) 108271467
chr17 48990706 48993151 ZNF274 GTRD no Bone Marrow (K562) 21770720
chr17 48990751 48994897 ZNF274 GTRD no Bone Marrow (K562) 21770721
chr17 48990847 48991107 ZNF274 GTRD no Bone Marrow (K562) 21770722
chr17 48990880 48991438 ZNF274 GTRD no Bone Marrow (K562) 21770723
chr17 48990932 48991395 ZNF274 GTRD no Bone Marrow (K562) 21770724
chr17 48990938 48991256 ZNF274 GTRD no Liver (HepG2) 21770725
chr17 48990945 48990966 IRF1 JASPAR yes 54732995
chr17 48990946 48990967 IRF1 JASPAR yes 54732996
chr17 48990950 48990971 IRF1 JASPAR yes 54732999
chr17 48990951 48990966 FOXP1 JASPAR yes 54733000
chr17 48990951 48990972 IRF1 JASPAR yes 54733001
chr17 48990952 48990973 IRF1 JASPAR yes 54733002
chr17 48990953 48990968 FOXP1 JASPAR yes 54733003
chr17 48990953 48990974 IRF1 JASPAR yes 54733004
chr17 48990955 48990970 FOXP1 JASPAR yes 54733005
chr17 48990956 48990971 FOXP1 JASPAR yes 54733006
chr17 48990957 48990972 FOXP1 JASPAR yes 54733007
chr17 48990957 48990978 IRF1 JASPAR yes 54733008
chr17 48990958 48990973 FOXP1 JASPAR yes 54733009
chr17 48990959 48990974 FOXP1 JASPAR yes 54733010
chr17 48990959 48990980 IRF1 JASPAR yes 54733011
chr17 48990963 48990984 IRF1 JASPAR yes 54733012
chr17 48990963 48990984 ZNF263 JASPAR yes 54733013
chr17 48990964 48990985 ZNF263 JASPAR yes 54733014
Genes associated with rs12953267[chr17:48990965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More