EnhancerDB
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  3. rs12958393[chr18:55873995]
Enhancers that have rs12958393[chr18:55873995]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs12958393[chr18:55873995]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55873989 55873999 NKX2-3 JASPAR yes 110926327
chr18 55873989 55874009 RREB1 JASPAR yes 110926328
chr18 55873990 55873998 ISL2 JASPAR yes 110926329
chr18 55873990 55873999 NKX3-2 JASPAR yes 110926330
chr18 55873993 55874013 RREB1 JASPAR yes 110926331
chr18 55873995 55874015 RREB1 JASPAR yes 110926332
Genes associated with rs12958393[chr18:55873995], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More