EnhancerDB
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  3. rs12988407[chr2:232543303]
Enhancers that have rs12988407[chr2:232543303]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12988407[chr2:232543303]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232543293 232543305 ZBTB7A JASPAR yes 81735529
chr2 232543294 232543306 ZBTB7B JASPAR yes 81735530
chr2 232543294 232543306 ZBTB7C JASPAR yes 81735531
chr2 232543299 232543319 RREB1 JASPAR yes 81735532
Genes associated with rs12988407[chr2:232543303], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More