EnhancerDB
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  3. rs12990283[chr2:232538228]
Enhancers that have rs12990283[chr2:232538228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12990283[chr2:232538228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435737
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435738
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435739
chr2 232538209 232538230 ZNF263 JASPAR yes 81734791
chr2 232538210 232538231 ZNF263 JASPAR yes 81734792
chr2 232538221 232538231 SP1 JASPAR yes 81734793
chr2 232538222 232538237 TFAP2A JASPAR yes 81734794
chr2 232538222 232538237 TFAP2C JASPAR yes 81734795
chr2 232538224 232538238 EBF1 JASPAR yes 81734796
chr2 232538225 232538236 EBF1 JASPAR yes 81734797
Genes associated with rs12990283[chr2:232538228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More