EnhancerDB
  1. Home
  2. SNP
  3. rs12992553[chr2:70360262]
Enhancers that have rs12992553[chr2:70360262]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 70317005 70376348 enh5639
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12992553[chr2:70360262]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 70359206 70360381 POLR2A UCSC Txn Factor no Conserved 107690711
chr2 70360250 70360267 RARA JASPAR yes 68265012
chr2 70360250 70360267 RARA JASPAR yes 74899347
chr2 70360261 70360276 ESR2 JASPAR yes 68265013
chr2 70360261 70360276 ESR2 JASPAR yes 74899349
chr2 70360262 70360266 ESR1 TRANSFAC yes 68265014
chr2 70360262 70360266 ESR1 TRANSFAC yes 74899350
Genes associated with rs12992553[chr2:70360262], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More