EnhancerDB
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  3. rs13089827[chr3:57034338]
Enhancers that have rs13089827[chr3:57034338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57012585 57055453 enh7240
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs13089827[chr3:57034338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57034327 57034340 NFKB2 JASPAR yes 2620799
chr3 57034332 57034352 RREB1 JASPAR yes 2620801
chr3 57034334 57034354 RREB1 JASPAR yes 2620802
chr3 57034336 57034356 RREB1 JASPAR yes 2620803
chr3 57034338 57034358 RREB1 JASPAR yes 2620804
Genes associated with rs13089827[chr3:57034338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More