EnhancerDB
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  3. rs13162378[chr5:79484959]
Enhancers that have rs13162378[chr5:79484959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs13162378[chr5:79484959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79484947 79484959 PKNOX1 JASPAR yes 63704008
chr5 79484947 79484959 PKNOX2 JASPAR yes 63704009
chr5 79484947 79484959 TGIF1 JASPAR yes 63704010
chr5 79484947 79484959 TGIF2 JASPAR yes 63704011
chr5 79484953 79484964 CDX2 JASPAR yes 63704012
chr5 79484954 79484965 HOXC11 JASPAR yes 63704013
chr5 79484954 79484965 HOXC12 JASPAR yes 63704014
chr5 79484955 79484964 CDX1 JASPAR yes 63704015
chr5 79484955 79484965 HOXC10 JASPAR yes 63704016
chr5 79484955 79484965 HOXD11 JASPAR yes 63704017
Genes associated with rs13162378[chr5:79484959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More