EnhancerDB
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  3. rs13172138[chr5:173210959]
Enhancers that have rs13172138[chr5:173210959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13172138[chr5:173210959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173210938 173210959 IRF1 JASPAR yes 67904779
chr5 173210942 173210963 IRF1 JASPAR yes 67904788
chr5 173210944 173210965 IRF1 JASPAR yes 67904789
chr5 173210946 173210967 IRF1 JASPAR yes 67904790
chr5 173210946 173210967 ZNF263 JASPAR yes 67904791
chr5 173210948 173210969 IRF1 JASPAR yes 67904792
chr5 173210950 173210971 ZNF263 JASPAR yes 67904793
chr5 173210953 173210974 ZNF263 JASPAR yes 67904794
chr5 173210954 173210975 IRF1 JASPAR yes 67904795
chr5 173210954 173210975 ZNF263 JASPAR yes 67904796
chr5 173210957 173210978 ZNF263 JASPAR yes 67904797
chr5 173210959 173210980 ZNF263 JASPAR yes 67904798
Genes associated with rs13172138[chr5:173210959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More