EnhancerDB
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  3. rs13185874[chr5:172305145]
Enhancers that have rs13185874[chr5:172305145]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172304783 172305546 vista50188
VISTA
Transcript factors that have rs13185874[chr5:172305145]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172305137 172305157 RREB1 JASPAR yes 67838294
chr5 172305137 172305157 RREB1 JASPAR yes 70764288
chr5 172305141 172305146 TFAP2A TRANSFAC yes 67838295
chr5 172305141 172305146 TFAP2A TRANSFAC yes 70764289
chr5 172305141 172305147 MZF1 JASPAR yes 67838296
chr5 172305141 172305147 MZF1 JASPAR yes 70764290
Genes associated with rs13185874[chr5:172305145], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More