EnhancerDB
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  3. rs13197409[chr6:30755066]
Enhancers that have rs13197409[chr6:30755066]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13197409[chr6:30755066]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30755066 30755087 REST JASPAR yes 101049615
Genes associated with rs13197409[chr6:30755066], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 30875961 30881883 + GTF2H4 ENSG00000213780.6 30875961 120895 Esophagus 1.98904e-06 6354
chr6 30875961 30881883 + GTF2H4 ENSG00000213780.6 30875961 120895 Ovary 0.187185 6354