EnhancerDB
  1. Home
  2. SNP
  3. rs13233954[chr7:130555984]
Enhancers that have rs13233954[chr7:130555984]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 130555356 130592615 enh10036
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13233954[chr7:130555984]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 130555980 130555985 SP1 TRANSFAC yes 18030219
chr7 130555981 130555986 SP1 TRANSFAC yes 18030220
chr7 130555981 130555990 THAP1 JASPAR yes 18030221
chr7 130555984 130555988 LFA1 TRANSFAC yes 18030222
Genes associated with rs13233954[chr7:130555984], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More