EnhancerDB
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  3. rs13324916[chr3:58037890]
Enhancers that have rs13324916[chr3:58037890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13324916[chr3:58037890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58037879 58037895 ZNF143 JASPAR yes 2669853
chr3 58037881 58037891 GSC2 JASPAR yes 2669854
chr3 58037881 58037891 GSC JASPAR yes 2669855
chr3 58037882 58037890 RHOXF1 JASPAR yes 2669856
chr3 58037882 58037891 PITX3 JASPAR yes 2669857
chr3 58037890 58037898 MGA JASPAR yes 2669858
chr3 58037890 58037898 TBX15 JASPAR yes 2669859
chr3 58037890 58037898 TBX1 JASPAR yes 2669860
chr3 58037890 58037898 TBX4 JASPAR yes 2669861
chr3 58037890 58037898 TBX5 JASPAR yes 2669862
chr3 58037890 58037903 SMAD2 JASPAR yes 2669863
Genes associated with rs13324916[chr3:58037890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More