EnhancerDB
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  3. rs13399799[chr2:38682998]
Enhancers that have rs13399799[chr2:38682998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs13399799[chr2:38682998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38682987 38683002 NFYB JASPAR yes 73143203
chr2 38682989 38683002 DUXA JASPAR yes 73143204
chr2 38682989 38683005 NFYA JASPAR yes 73143205
chr2 38682990 38683001 DUX4 JASPAR yes 73143206
chr2 38682990 38683008 NFYA JASPAR yes 73143207
chr2 38682991 38683003 PBX1 JASPAR yes 73143208
chr2 38682994 38682998 H1TF2 TRANSFAC yes 73143209
chr2 38682994 38682998 NFE TRANSFAC yes 73143210
chr2 38682994 38682998 SRF TRANSFAC yes 73143211
chr2 38682998 38683011 POU2F2 JASPAR yes 73143212
Genes associated with rs13399799[chr2:38682998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More