EnhancerDB
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  3. rs13408972[chr2:240185806]
Enhancers that have rs13408972[chr2:240185806]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13408972[chr2:240185806]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240185803 240185808 SP1 TRANSFAC yes 82223087
chr2 240185804 240185809 SP1 TRANSFAC yes 82223088
chr2 240185804 240185810 SP1 TRANSFAC yes 82223089
Genes associated with rs13408972[chr2:240185806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More