EnhancerDB
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  3. rs13414188[chr2:232526743]
Enhancers that have rs13414188[chr2:232526743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 232526700 232527324 vista35166
VISTA
Transcript factors that have rs13414188[chr2:232526743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232526530 232527637 E2F1 UCSC Txn Factor no Conserved 107690829
chr2 232526530 232527637 E2F1 UCSC Txn Factor no Conserved 108435710
chr2 232526546 232528057 POLR2A UCSC Txn Factor no Conserved 107690830
chr2 232526546 232528057 POLR2A UCSC Txn Factor no Conserved 108435711
chr2 232526624 232527548 YY1 UCSC Txn Factor no Conserved 107690831
chr2 232526624 232527548 YY1 UCSC Txn Factor no Conserved 108435712
chr2 232526649 232527249 MYC UCSC Txn Factor no Conserved 108435713
chr2 232526654 232527398 TAF1 UCSC Txn Factor no Conserved 107690832
chr2 232526654 232527398 TAF1 UCSC Txn Factor no Conserved 108435714
chr2 232526732 232526745 TFAP2A JASPAR yes 22229555
chr2 232526732 232526745 TFAP2B JASPAR yes 22229556
chr2 232526732 232526745 TFAP2C JASPAR yes 22229557
chr2 232526732 232526745 TFAP2A JASPAR yes 81733170
chr2 232526732 232526745 TFAP2B JASPAR yes 81733171
chr2 232526732 232526745 TFAP2C JASPAR yes 81733172
chr2 232526736 232527361 E2F6 UCSC Txn Factor no Conserved 107690833
chr2 232526736 232527361 E2F6 UCSC Txn Factor no Conserved 108435715
chr2 232526738 232526758 PPARG JASPAR yes 22229558
chr2 232526738 232526758 PPARG JASPAR yes 81733173
chr2 232526741 232526750 NF-kappaB TRANSFAC yes 22229559
chr2 232526741 232526750 NF-kappaB TRANSFAC yes 81733174
chr2 232526741 232526751 NFKB1 JASPAR yes 22229560
chr2 232526741 232526751 REL JASPAR yes 22229561
chr2 232526741 232526751 NFKB1 JASPAR yes 81733175
chr2 232526741 232526751 REL JASPAR yes 81733176
chr2 232526741 232526752 NFKB1 JASPAR yes 22229562
chr2 232526741 232526752 NFKB1 JASPAR yes 81733177
Genes associated with rs13414188[chr2:232526743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More