EnhancerDB
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  3. rs1343025[chr6:44011561]
Enhancers that have rs1343025[chr6:44011561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 44011469 44011879 vista52043
VISTA
Transcript factors that have rs1343025[chr6:44011561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44011372 44011696 CEBPB UCSC Txn Factor no Conserved 108540378
chr6 44011421 44011662 EGR1 UCSC Txn Factor no Conserved 108540379
chr6 44011554 44011568 TLX1 JASPAR yes 70368518
chr6 44011554 44011568 TLX1 JASPAR yes 101816851
Genes associated with rs1343025[chr6:44011561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 44221833 44225291 - SLC35B2 ENSG00000157593.12 44225291 210272 Esophagus 0.200063 6632