EnhancerDB
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Enhancers that have rs138013978[chr12:46609181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
chr12 46608402 46609191 vista13214
VISTA
Transcript factors that have rs138013978[chr12:46609181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46608203 46609441 ZBTB33 GTRD no Brain (SK-N-SH) 108026929
chr12 46608234 46609458 ZBTB33 GTRD no Brain (SK-N-SH) 108026930
chr12 46608271 46609345 ZBTB33 GTRD no Brain (SK-N-SH) 108026932
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 21541050
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026933
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026934
chr12 46608428 46609237 ZBTB33 GTRD no Brain (SK-N-SH) 108026941
chr12 46608855 46609308 ZNF274 GTRD no Bone Marrow (K562) 21541060
chr12 46608855 46609308 ZNF274 GTRD no Bone Marrow (K562) 108026954
chr12 46608859 46609213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541061
chr12 46608859 46609213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026955
chr12 46608861 46609696 ZNF274 GTRD no Blood (GM12878) 21541062
chr12 46608861 46609696 ZNF274 GTRD no Blood (GM12878) 108026956
chr12 46608892 46609222 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541065
chr12 46608892 46609222 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026960
chr12 46609027 46609303 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541067
chr12 46609027 46609303 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026962
chr12 46609079 46609485 ZNF274 GTRD no Liver (HepG2) 108026963
chr12 46609114 46609838 GATA3 GTRD no Thymus 21541068
chr12 46609114 46609838 GATA3 GTRD no Thymus 108026964
chr12 46609114 46609838 GATA3 GTRD no Thymus 108026965
Genes associated with rs138013978[chr12:46609181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More