EnhancerDB
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  3. rs138033713[chr19:5952936]
Enhancers that have rs138033713[chr19:5952936]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138033713[chr19:5952936]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5952336 5955349 ZNF274 GTRD no Bone Marrow (K562) 21843714
chr19 5952336 5955349 ZNF274 GTRD no Bone Marrow (K562) 108376060
chr19 5952423 5955648 ZNF274 GTRD no Bone Marrow (K562) 21843715
chr19 5952423 5955648 ZNF274 GTRD no Bone Marrow (K562) 108376061
chr19 5952777 5955130 ZNF274 GTRD no Bone Marrow (K562) 21843716
chr19 5952777 5955130 ZNF274 GTRD no Bone Marrow (K562) 108376062
chr19 5952846 5954419 ZNF274 GTRD no Bone Marrow (K562) 21843717
chr19 5952846 5954419 ZNF274 GTRD no Bone Marrow (K562) 108376063
chr19 5952887 5953688 ZNF274 GTRD no Blood (GM12878) 108376064
chr19 5952893 5953567 ZNF274 GTRD no Bone Marrow (K562) 21843718
chr19 5952893 5953567 ZNF274 GTRD no Bone Marrow (K562) 108376065
chr19 5952894 5953417 ZBTB33 GTRD no Brain (SK-N-SH) 21843719
chr19 5952894 5953417 ZBTB33 GTRD no Brain (SK-N-SH) 108376066
chr19 5952909 5954541 ZNF274 GTRD no Bone Marrow (K562) 21843720
chr19 5952909 5954541 ZNF274 GTRD no Bone Marrow (K562) 108376067
chr19 5952913 5953467 ZNF274 GTRD no Bone Marrow (K562) 21843721
chr19 5952913 5953467 ZNF274 GTRD no Bone Marrow (K562) 108376068
chr19 5952935 5952948 SMAD2 JASPAR yes 112247378
Genes associated with rs138033713[chr19:5952936], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More