EnhancerDB
  1. Home
  2. SNP
  3. rs138084790[chr16:85284111]
Enhancers that have rs138084790[chr16:85284111]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138084790[chr16:85284111]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85282822 85285082 TCF7L2 GTRD no Colon (HCT116) 21722043
chr16 85282823 85284771 TCF7L2 GTRD no Colon (HCT116) 21722044
chr16 85283768 85284963 TCF7L2 GTRD no Colon (HCT116) 21722054
chr16 85283785 85284150 ZNF274 GTRD no Bone Marrow (K562) 21722055
chr16 85283814 85285381 ZNF143 GTRD no Epithelial (MCF-7) 21722056
chr16 85283822 85284317 ZNF143 GTRD no Epithelial (MCF-7) 21722057
chr16 85283837 85284893 TCF7L2 GTRD no Colon (HCT116) 21722058
chr16 85283839 85284489 ZNF143 GTRD no Epithelial (MCF-7) 21722059
chr16 85283863 85284882 TCF7L2 GTRD no Colon (HCT116) 21722060
chr16 85283912 85284895 TCF7L2 GTRD no Colon (HCT116) 21722061
chr16 85284071 85284523 TCF7L2 GTRD no Colon (HCT116) 21722062
chr16 85284090 85284488 ZNF274 GTRD no Bone Marrow (K562) 21722063
chr16 85284111 85284127 RFX2 JASPAR yes 12038724
chr16 85284111 85284127 RFX3 JASPAR yes 12038725
chr16 85284111 85284127 RFX4 JASPAR yes 12038726
chr16 85284111 85284127 RFX5 JASPAR yes 12038727
Genes associated with rs138084790[chr16:85284111], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More