EnhancerDB
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  3. rs138156760[chr1:234898071]
Enhancers that have rs138156760[chr1:234898071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138156760[chr1:234898071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234897364 234901169 ZNF274 GTRD no Cervix (HeLa-S3) 21397677
chr1 234898061 234898071 HOXA13 JASPAR yes 36312767
chr1 234898061 234898071 HOXB13 JASPAR yes 36312768
chr1 234898061 234898071 HOXD13 JASPAR yes 36312769
chr1 234898061 234898072 HOXA10 JASPAR yes 36312770
chr1 234898061 234898072 HOXD12 JASPAR yes 36312771
chr1 234898062 234898071 CDX1 JASPAR yes 36312772
chr1 234898062 234898073 CDX2 JASPAR yes 36312773
Genes associated with rs138156760[chr1:234898071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More