EnhancerDB
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  3. rs138197827[chr17:80509730]
Enhancers that have rs138197827[chr17:80509730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138197827[chr17:80509730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80509725 80509737 HES5 JASPAR yes 56373882
chr17 80509725 80509737 HES7 JASPAR yes 56373883
chr17 80509725 80509737 PKNOX1 JASPAR yes 56373884
chr17 80509725 80509737 PKNOX2 JASPAR yes 56373885
chr17 80509725 80509737 TGIF1 JASPAR yes 56373886
chr17 80509725 80509737 TGIF2 JASPAR yes 56373887
chr17 80509726 80509746 ESR1 JASPAR yes 56373888
Genes associated with rs138197827[chr17:80509730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More