EnhancerDB
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  3. rs138198603[chr6:88435427]
Enhancers that have rs138198603[chr6:88435427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs138198603[chr6:88435427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88435069 88435532 RUNX3 UCSC Txn Factor no Conserved 108540934
chr6 88435262 88435578 EBF1 UCSC Txn Factor no Conserved 108540935
chr6 88435412 88435427 FOXP1 JASPAR yes 70397758
chr6 88435412 88435427 FOXP1 JASPAR yes 103325344
Genes associated with rs138198603[chr6:88435427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More