EnhancerDB
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  3. rs138198990[chr1:235162624]
Enhancers that have rs138198990[chr1:235162624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs138198990[chr1:235162624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235159909 235162647 ZNF274 GTRD no Bone Marrow (K562) 21403242
chr1 235159996 235162786 ZNF274 GTRD no Bone Marrow (K562) 21403244
chr1 235160092 235162693 ZNF274 GTRD no Blood (GM12878) 21403248
chr1 235160359 235162808 ZNF274 GTRD no Blood (GM12878) 21403260
chr1 235160423 235162742 ZNF274 GTRD no Blood (GM12878) 21403267
chr1 235162464 235162920 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403483
chr1 235162614 235162629 IRF9 JASPAR yes 36344358
chr1 235162616 235162634 IRF2 JASPAR yes 36344359
Genes associated with rs138198990[chr1:235162624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More