EnhancerDB
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  3. rs138408936[chr1:226875247]
Enhancers that have rs138408936[chr1:226875247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226874961 226875281 vista5377
VISTA
Transcript factors that have rs138408936[chr1:226875247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226873565 226875373 ZNF274 GTRD no Cervix (HeLa-S3) 21387186
chr1 226873565 226875373 ZNF274 GTRD no Cervix (HeLa-S3) 107876175
chr1 226873586 226876636 ZNF274 GTRD no Cervix (HeLa-S3) 21387187
chr1 226873586 226876636 ZNF274 GTRD no Cervix (HeLa-S3) 107876176
chr1 226873586 226876636 ZNF274 GTRD no Cervix (HeLa-S3) 107876177
chr1 226873712 226876837 ZNF274 GTRD no Bone Marrow (K562) 107876179
chr1 226873712 226876837 ZNF274 GTRD no Bone Marrow (K562) 107876180
chr1 226873712 226876837 ZNF274 GTRD no Bone Marrow (K562) 107876181
chr1 226875158 226876525 ZNF274 GTRD no Cervix (HeLa-S3) 21387191
chr1 226875158 226876525 ZNF274 GTRD no Cervix (HeLa-S3) 107876188
chr1 226875158 226876525 ZNF274 GTRD no Cervix (HeLa-S3) 107876189
chr1 226875165 226875637 CTCF UCSC Txn Factor no Conserved 107876190
chr1 226875173 226876525 ZNF274 GTRD no Bone Marrow (K562) 107876191
chr1 226875173 226876525 ZNF274 GTRD no Bone Marrow (K562) 107876192
chr1 226875235 226875595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387192
chr1 226875235 226875595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107876193
Genes associated with rs138408936[chr1:226875247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More