EnhancerDB
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  3. rs138472925[chr6:16346183]
Enhancers that have rs138472925[chr6:16346183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138472925[chr6:16346183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16346177 16346192 FOXP1 JASPAR yes 100290439
chr6 16346178 16346189 HOXA10 JASPAR yes 100290440
chr6 16346179 16346189 HOXB13 JASPAR yes 100290441
chr6 16346179 16346189 HOXD13 JASPAR yes 100290442
chr6 16346183 16346189 TBP TRANSFAC yes 100290443
Genes associated with rs138472925[chr6:16346183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More