EnhancerDB
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  3. rs138504282[chr12:116975990]
Enhancers that have rs138504282[chr12:116975990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138504282[chr12:116975990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 21577296
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 108061742
chr12 116975558 116976448 TEF1 GTRD no Bone (Osteoblast) 21577320
chr12 116975712 116976251 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577321
chr12 116975728 116976324 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577322
chr12 116975776 116976292 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577323
chr12 116975818 116976202 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577324
chr12 116975824 116976120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577325
chr12 116975850 116976260 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577326
chr12 116975853 116976163 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577327
chr12 116975861 116976217 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577328
chr12 116975864 116976262 ZNF274 GTRD no Cervix (HeLa-S3) 21577329
chr12 116975868 116976183 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577330
chr12 116975884 116976474 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577331
chr12 116975886 116976150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577332
chr12 116975892 116976202 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577333
chr12 116975899 116976172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577334
chr12 116975906 116976047 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577335
chr12 116975908 116976172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577336
chr12 116975918 116976222 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577337
chr12 116975919 116976150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577338
chr12 116975934 116976139 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577339
chr12 116975934 116976429 ZBTB33 GTRD no Brain (SK-N-SH) 21577340
chr12 116975956 116976098 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577341
chr12 116975966 116976183 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577342
chr12 116975972 116975993 IRF1 JASPAR yes 124008676
chr12 116975976 116975990 STAT1 JASPAR yes 124008681
chr12 116975976 116975991 STAT2 JASPAR yes 124008682
chr12 116975976 116975994 IRF2 JASPAR yes 124008683
chr12 116975976 116976386 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577343
Genes associated with rs138504282[chr12:116975990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More