EnhancerDB
  1. Home
  2. SNP
  3. rs138512794[chr17:56016894]
Enhancers that have rs138512794[chr17:56016894]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138512794[chr17:56016894]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56016884 56016898 PLAG1 JASPAR yes 55002268
chr17 56016885 56016899 PLAG1 JASPAR yes 55002269
chr17 56016892 56016906 GLIS2 JASPAR yes 55002270
chr17 56016892 56016906 GLIS3 JASPAR yes 55002271
chr17 56016892 56016906 ZIC1 JASPAR yes 55002272
chr17 56016892 56016907 ZIC3 JASPAR yes 55002273
chr17 56016892 56016907 ZIC4 JASPAR yes 55002274
Genes associated with rs138512794[chr17:56016894], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More