EnhancerDB
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  3. rs138518728[chr12:125208441]
Enhancers that have rs138518728[chr12:125208441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138518728[chr12:125208441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125208106 125208482 ZNF143 GTRD no Epithelial (MCF-7) 21582341
chr12 125208434 125208444 ID4 JASPAR yes 124413748
chr12 125208435 125208444 SNAI2 JASPAR yes 124413749
chr12 125208436 125208441 USF2 TRANSFAC yes 124413750
Genes associated with rs138518728[chr12:125208441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More