EnhancerDB
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  3. rs138540712[chr1:172323252]
Enhancers that have rs138540712[chr1:172323252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138540712[chr1:172323252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172323233 172323253 RREB1 JASPAR yes 33125039
chr1 172323235 172323255 RREB1 JASPAR yes 33125040
chr1 172323237 172323257 RREB1 JASPAR yes 33125041
chr1 172323252 172323273 ZNF263 JASPAR yes 33125042
Genes associated with rs138540712[chr1:172323252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More