EnhancerDB
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  3. rs138550466[chr1:171395576]
Enhancers that have rs138550466[chr1:171395576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs138550466[chr1:171395576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171395572 171395593 IRF1 JASPAR yes 33079311
chr1 171395574 171395589 STAT2 JASPAR yes 33079312
chr1 171395575 171395589 STAT1 JASPAR yes 33079313
Genes associated with rs138550466[chr1:171395576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More