EnhancerDB
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  3. rs138554624[chr1:235147717]
Enhancers that have rs138554624[chr1:235147717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs138554624[chr1:235147717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235146383 235149741 POLR2A UCSC Txn Factor no Conserved 107885561
chr1 235146512 235148199 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402973
chr1 235146512 235148199 RUNX3 UCSC Txn Factor no Conserved 107885562
chr1 235146512 235148199 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885563
chr1 235146566 235148196 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402974
chr1 235146566 235148196 NFIC UCSC Txn Factor no Conserved 107885564
chr1 235146566 235148196 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885565
chr1 235146795 235149741 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402975
chr1 235146795 235149741 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885567
chr1 235146959 235148251 ZNF274 GTRD no Blood (GM12878) 21402988
chr1 235146959 235148251 ZNF274 GTRD no Blood (GM12878) 107885581
chr1 235146983 235147963 ZNF274 GTRD no Blood (GM12878) 21402990
chr1 235146983 235147963 ZNF274 GTRD no Blood (GM12878) 107885583
chr1 235147066 235147807 ZNF274 GTRD no Blood (GM12878) 21402993
chr1 235147066 235147807 ZNF274 GTRD no Blood (GM12878) 107885586
chr1 235147085 235148171 ZNF274 GTRD no Blood (GM12878) 21402994
chr1 235147085 235148171 ZNF274 GTRD no Blood (GM12878) 107885587
chr1 235147125 235148102 ZNF274 GTRD no Blood (GM12878) 21402996
chr1 235147140 235147756 ZNF274 GTRD no Blood (GM12878) 21402997
chr1 235147174 235148038 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402998
chr1 235147200 235147790 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403000
chr1 235147218 235147734 ZNF274 GTRD no Blood (GM12878) 21403002
chr1 235147244 235148092 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403005
chr1 235147279 235148037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403007
chr1 235147289 235148052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403008
chr1 235147311 235147829 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403009
chr1 235147311 235147940 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403010
chr1 235147331 235147903 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403011
chr1 235147333 235148045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403012
chr1 235147335 235147912 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403013
chr1 235147344 235147851 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403015
chr1 235147347 235147852 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403017
chr1 235147353 235147939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403019
chr1 235147357 235148216 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403020
chr1 235147361 235147934 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403021
chr1 235147378 235147914 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403022
chr1 235147403 235147896 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403023
chr1 235147407 235147717 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403025
chr1 235147409 235147825 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403027
chr1 235147410 235147746 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403028
chr1 235147429 235148012 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403030
chr1 235147430 235147794 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403031
chr1 235147435 235147765 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403032
chr1 235147436 235147786 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403033
chr1 235147439 235147759 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403034
chr1 235147443 235147773 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403035
chr1 235147449 235147904 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403036
chr1 235147459 235147963 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403038
chr1 235147460 235147860 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403039
chr1 235147472 235147996 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403041
chr1 235147473 235147757 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403042
chr1 235147478 235147754 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403043
chr1 235147480 235147820 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403044
chr1 235147483 235147753 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403045
chr1 235147483 235147919 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403046
chr1 235147486 235147876 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403047
chr1 235147495 235148145 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403048
chr1 235147500 235147776 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403050
chr1 235147502 235147758 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403051
chr1 235147502 235147903 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21403052
chr1 235147503 235147907 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403053
chr1 235147507 235147917 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403054
chr1 235147512 235147892 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403056
chr1 235147517 235147937 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403057
chr1 235147521 235147917 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403058
chr1 235147522 235147802 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403059
chr1 235147530 235147752 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403060
chr1 235147531 235147907 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403061
chr1 235147533 235148123 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403062
chr1 235147535 235148195 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403063
chr1 235147555 235147865 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403065
chr1 235147560 235147944 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403066
chr1 235147567 235147897 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403067
chr1 235147569 235147829 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403068
chr1 235147581 235147771 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403070
chr1 235147583 235147813 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403071
chr1 235147584 235147840 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21403072
chr1 235147584 235147954 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403073
chr1 235147586 235147906 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403074
chr1 235147599 235148109 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403075
chr1 235147600 235147880 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403076
chr1 235147620 235148000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403077
chr1 235147628 235147807 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403078
chr1 235147634 235147998 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403079
chr1 235147638 235148038 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403080
chr1 235147639 235148003 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403081
chr1 235147644 235147786 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21403082
chr1 235147648 235148058 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403083
chr1 235147654 235148004 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403084
chr1 235147658 235148098 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403085
chr1 235147671 235147995 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403086
chr1 235147674 235147894 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403087
chr1 235147681 235148025 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403088
chr1 235147687 235147920 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403089
chr1 235147687 235148077 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403090
chr1 235147688 235147886 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403091
chr1 235147699 235147921 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21403092
chr1 235147700 235147909 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403093
chr1 235147705 235147718 SMAD2 JASPAR yes 36342073
chr1 235147714 235148078 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403094
chr1 235147717 235147974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403095
Genes associated with rs138554624[chr1:235147717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More