EnhancerDB
  1. Home
  2. SNP
  3. rs138589075[chr1:205270123]
Enhancers that have rs138589075[chr1:205270123]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138589075[chr1:205270123]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205268811 205270218 TCF7L2 GTRD no Colon (HCT116) 21371750
chr1 205269924 205270834 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861803
chr1 205269924 205270988 POLR2A UCSC Txn Factor no Conserved 107861804
chr1 205270085 205270741 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861805
chr1 205270085 205271000 EP300 UCSC Txn Factor no Conserved 107861806
chr1 205270085 205271000 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861807
chr1 205270094 205270971 TCF12 UCSC Txn Factor no Conserved 107861808
chr1 205270094 205270971 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861809
chr1 205270116 205270126 EN2 JASPAR yes 34753542
chr1 205270116 205270126 GBX1 JASPAR yes 34753543
chr1 205270116 205270126 GBX2 JASPAR yes 34753544
chr1 205270117 205270125 DLX6 JASPAR yes 34753545
chr1 205270117 205270125 MSX1 JASPAR yes 34753546
chr1 205270123 205270499 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371754
chr1 205270123 205270793 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861810
Genes associated with rs138589075[chr1:205270123], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More